Detail Information

P450 Protein:

P450 Symbolcyp28
Protein NamePentalenic acid synthase
Uniprot IDQ825I8
EC Number1.14.15.11
SpeciesStreptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680)
Txid 227882
P450 Protein Structure
Model Confidence (pLDDT)
Very high (>90)
High (90 > 70)
Low (70 > 50)
Very low (<50)
Subcellular LocationEndoplasmic reticulum membrane; Multi-pass membrane protein Microsome membrane; Multi-pass membrane protein
Protein Sequence GO

Reaction Scheme:

Chemical Conversion C15H21O2- + Fe4S4 + O2 + H+ → C15H21O3- + Fe4S4 + H2O
Reaction TypeOxidation
Chemical BondCH2
RheaID 34499

1-Deoxypentalenate

+

[4Fe-4S]1+ cluster

+

O2

+

H+

cyp28

Pentalenate

+

[4Fe-4S]2+ cluster

+

H2O

Substrate Information:

Substrate Name 1-Deoxypentalenate
Substrate Chemical FormulaC15H21O2-
Substrate PubChem CID70678894
Substrate SmilesC[C@@H]1CC[C@@H]2[C@]13CC(C[C@H]3C=C2C(=O)[O-])(C)C
Substrate Structure
Substrate Name [4Fe-4S]1+ cluster
Substrate Chemical FormulaFe4S4
Substrate Smiles[S]12[Fe]3[S]4[Fe]1[S]1[Fe]2[S]3[Fe+]41
Substrate Structure
Substrate Name O2
Substrate Chemical FormulaO2
Substrate PubChem CID977
Substrate CAS Number7782-44-7
Substrate SmilesO=O
Substrate Structure
Substrate Name H+
Substrate Chemical FormulaH+
Substrate PubChem CID1038
Substrate CAS Number12408-02-5
Substrate Smiles[H+]
Substrate Structure

Product Information:

Product Name Pentalenate
Product Chemical FormulaC15H21O3-
Product PubChem CID70678937
Product SmilesC[C@@H]1CC[C@@H]2[C@]13CC([C@@H]([C@H]3C=C2C(=O)[O-])O)(C)C
Product Structure
Product Name [4Fe-4S]2+ cluster
Product Chemical FormulaFe4S4
Product Smiles[S]12[Fe]3[S]4[Fe]1[S]1[Fe+]2[S]3[Fe+]41
Product Structure
Product Name H2O
Product Chemical FormulaH2O
Product PubChem CID962
Product CAS Number7732-18-5
Product SmilesO
Product Structure

References:

Title: Pentalenic acid is a shunt metabolite in the biosynthesis of the pentalenolactone family of metabolites: hydroxylation of 1-deoxypentalenic acid mediated by CYP105D7 (SAV_7469) of Streptomyces avermitilis.
PMID: 21081950
Journal: The Journal of antibiotics
Year: 2011/1/1

Contact zhy1001@alu.uestc.edu.cn or yangzhang@cdutcm.edu.cn
© Department of Bioinformatics